{"id":143,"date":"2018-10-25T17:31:41","date_gmt":"2018-10-25T15:31:41","guid":{"rendered":"https:\/\/sites.uclouvain.be\/soumillionlab\/?page_id=143"},"modified":"2022-01-19T16:22:41","modified_gmt":"2022-01-19T15:22:41","slug":"publications","status":"publish","type":"page","link":"https:\/\/sites.uclouvain.be\/soumillionlab\/publications\/","title":{"rendered":"Publications"},"content":{"rendered":"
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<\/div>\n

Selected Journal Article<\/h2>\n

Below are selected articles displaying the laboratory’s current research interest. A full list of publication can be found on the website of the Universit\u00e9 catholique de Louvain.<\/a><\/p>\n

2021<\/h3>\n
Godessart, Pierre ; Lannoy, Ad\u00e9lie ; Dieu, Marc ; Van der Verren, Sander E ; Soumillion, Patrice ; et. al.\u00a0\u03b2-Barrels covalently link peptidoglycan and the outer membrane in the \u03b1-proteobacterium Brucella abortus..<\/i>\u00a0In:\u00a0Nature microbiology<\/i>, Vol. 6, no.1, p. 27-33 (2021)<\/div>\n
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http:\/\/hdl.handle.net\/2078\/243891<\/a><\/div>\n
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2020<\/h3>\n

Yang, Jinsung ; Petitjean, Simon J. L. ; Koehler, Melanie ; Zhang, Qingrong ; Dumitru, Andra C. ; et. al.\u00a0Molecular interaction and inhibition of SARS-CoV-2 binding to the ACE2 receptor.<\/i>\u00a0In:\u00a0Nature Communications<\/i>, Vol. 11, no.1, p. 4541 (2020)<\/p>\n

http:\/\/hdl.handle.net\/2078.1\/238509<\/a><\/p>\n

Dorrazehi, Gol Mohammad ; Worms, Sebastian ; Chirakadavil, Jason Baby ; Mignolet, Johann ; Hols, Pascal ; et. al.\u00a0Building scarless gene libraries in the chromosome of bacteria.<\/i>\u00a0In: Iranzo, Olga, Roque, Ana Cec\u00edlia,\u00a0Springer Protocols \u2013 Peptide and Protein Engineering, From Concepts to Biotechnological Applications<\/i>, \u00a02020<\/p>\n

http:\/\/hdl.handle.net\/2078.1\/231618<\/a><\/p>\n

Gargiulo, Serena ; Soumillion, Patrice.\u00a0Directed evolution for enzyme development in biocatalysis..<\/i>\u00a0In:\u00a0Current opinion in chemical biology<\/i>, Vol. 61, p. 107-113 (2020)<\/p>\n

http:\/\/hdl.handle.net\/2078.1\/243893<\/a><\/p>\n

Khan, Mohammad Shahneawz ; Gargiulo, Serena ; Soumillion, Patrice. Promiscuous activity of 3-isopropylmalate dehydrogenase produced at physiological level affords Escherichia coli growth on d-malate..<\/i>\u00a0In: FEBS letters<\/i>, (2020)<\/p>\n

http:\/\/hdl.handle.net\/2078.1\/231614<\/a><\/p>\n<\/div>\n

Desguin, Beno\u00eet ; Urdiain-Arraiza, Julian ; Da Costa, Matthieu ; Fellner, Matthias ; Hu, Jian ; et. al.\u00a0Uncovering a superfamily of nickel-dependent hydroxyacid racemases and epimerases..<\/i>\u00a0In:\u00a0Scientific reports<\/i>, Vol. 10, no.1, p. 18123 (2020)<\/p>\n

http:\/\/hdl.handle.net\/2078.1\/241914<\/a><\/p>\n

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2019<\/h3>\n

van den Biggelaar, Ludivine ; Soumillion, Patrice ; Debecker, Damien P.. Biocatalytic transamination in a monolithic flow reactor: improving enzyme grafting for enhanced performance.<\/i>\u00a0In: RSC Advances<\/i>, Vol. 9, no.32, p. 18538-18546 (2019)<\/p>\n

http:\/\/hdl.handle.net\/2078.1\/216580<\/a><\/p>\n

2018<\/h3>\n

Crowet, Jean Marc ; Nasir, Mehmet Nail ; Dony, Nicolas ; Deschamps, Antoine ; Stroobant, Vincent ; et. al. Insight into the Self-Assembling Properties of Peptergents: A Molecular Dynamics Simulation Study..<\/i>\u00a0In: International Journal of Molecular Sciences (Print)<\/i>, Vol. 19, no.9, p. 2772 (2018)<\/p>\n

http:\/\/hdl.handle.net\/2078.1\/203722<\/a><\/p>\n

Desguin, Beno\u00eet ; Fellner, Matthias ; Riant, Olivier ; Hu, Jian ; Hausinger, Robert ; Hols, Pascal ; Soumillion, Patrice. Biosynthesis of the nickel-pincer nucleotide cofactor of lactate racemase requires a CTP-dependent cyclometallase.<\/i>. In: Journal of Biological Chemistry<\/i>, (2018). doi:10.1074\/jbc.RA118.003741.<\/p>\n

http:\/\/hdl.handle.net\/2078.1\/199517<\/a><\/p>\n

2017<\/h3>\n<\/div>\n
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van den Biggelaar, Ludivine ; Soumillion, Patrice ; Debecker, Damien P.. Enantioselective Transamination in Continuous Flow Mode with Transaminase Immobilized in a Macrocellular Silica Monolith<\/i>. In: Catalysts<\/i>, Vol. 7, no.54, p. 1-13 (2017). doi:10.3390\/catal7020054.<\/p>\n<\/div>\n<\/div>\n

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http:\/\/hdl.handle.net\/2078.1\/182359<\/a><\/p>\n<\/div>\n<\/div>\n

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Galka, Pierre ; Jamez, Elisabeth ; Joachim, Gilles ; Soumillion, Patrice. QuickLib, a method for building fully synthetic plasmid libraries by seamless cloning of degenerate oligonucleotides.<\/i>. In: PLoS One<\/i>, Vol. 12, p. e0175146 (2017). doi:10.1371\/journal.pone.0175146 (Soumis).<\/p>\n

http:\/\/hdl.handle.net\/2078.1\/192409<\/a><\/p>\n<\/div>\n<\/div>\n

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Galka, Pierre ; Jamez, Elisabeth ; Joachim, Gilles ; Soumillion, Patrice. QuickLib, a method for building fully synthetic plasmid libraries by seamless cloning of degenerate oligonucleotides.<\/i>. In: PLoS One<\/i>, Vol. 12, no.4, p. e0175146 (2017). doi:10.1371\/journal.pone.0175146.<\/p>\n

http:\/\/hdl.handle.net\/2078.1\/185861<\/a><\/p>\n<\/div>\n<\/div>\n

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Desguin, Beno\u00eet ; Soumillion, Patrice ; Hausinger, Robert P. ; Hols, Pascal. Unexpected complexity in the lactate racemization system of lactic acid bacteria<\/i>. In: FEMS Microbiology Reviews<\/i>, Vol. 41, no. Supp_1, p. S71-S83 (2017 Aug 1). doi:10.1093\/femsre\/fux021.<\/p>\n

http:\/\/hdl.handle.net\/2078.1\/185722<\/a><\/p>\n<\/div>\n<\/div>\n

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2016<\/strong><\/h3>\n
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Desguin, Beno\u00eet ; Soumillion, Patrice ; Hols, Pascal ; Hausinger, Robert P. Nickel-pincer cofactor biosynthesis involves LarB-catalyzed pyridinium carboxylation and LarE-dependent sacrificial sulfur insertion.<\/i>. In: Proceedings of the National academy of sciences of the United States of America<\/i>, Vol. 113, no.20, p. 5598-5603 (2016). doi:10.1073\/pnas.1600486113.<\/p>\n

http:\/\/hdl.handle.net\/2078.1\/180443<\/a><\/p>\n<\/div>\n<\/div>\n

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2015<\/strong><\/h3>\n
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Desguin, Beno\u00eet ; Zhang, Tuo ; Soumillion, Patrice ; Hols, Pascal ; Hu, Jian ; Hausinger, Robert P. A tethered niacin-derived pincer complex with a nickel-carbon bond in lactate racemase.<\/i>. In: Science<\/i>, Vol. 349, no.6243, p. 66-69 (2015). doi:10.1126\/science.aab2272.<\/p>\n

http:\/\/hdl.handle.net\/2078.1\/162199<\/a><\/p>\n<\/div>\n<\/div>\n

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Woronoff, Gabrielle ; Ryckelynck, Micha\u00ebl ; Wessel, Julia ; Schicke, Olivier ; Griffiths, Andrew D ; Soumillion, Patrice. Activity-Fed Translation (AFT) Assay: A New High-Throughput Screening Strategy for Enzymes in Droplets.<\/i>. In: ChemBioChem : a European journal of chemical biology<\/i>, Vol. 16, no. 9, p. 1343-1349 (2015). doi:10.1002\/cbic.201500087.<\/p>\n

http:\/\/hdl.handle.net\/2078.1\/162036<\/a><\/p>\n<\/div>\n<\/div>\n

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Proost, Joris ; Deschuyteneer, Genevi\u00e8ve ; Santoro, Ronny ; Van Overmeere, Quentin ; Soumillion, Patrice ; Flandre, Denis. Filamentous Phages Displaying Multivalent Peptide Motives With Specific Affinity To Anodic Alumina Surfaces<\/i>. In: Journal of Biosensors & Bioelectronics<\/i>, Vol. 6, no. 1, p. 1000162 (2015). doi:10.4172\/2155-6210.1000162.<\/p>\n

http:\/\/hdl.handle.net\/2078.1\/159065<\/a><\/p>\n<\/div>\n<\/div>\n

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2014<\/strong><\/h3>\n
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Vorobieva, Anastassia A ; Khan, Mohammad Shahneawz ; Soumillion, Patrice. Escherichia coli D-malate dehydrogenase, a generalist enzyme active in the leucine biosynthesis pathway.<\/i>. In: Journal of Biological Chemistry<\/i>, Vol. 289, no.42, p. 29086-29096 (2014). doi:10.1074\/jbc.M114.595363.<\/p>\n

http:\/\/hdl.handle.net\/2078.1\/156157<\/a><\/p>\n<\/div>\n<\/div>\n

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Desguin, Beno\u00eet ; Goffin, Philippe ; Viaene, Eric ; Kleerebezem, Michiel ; Martin-Diaconescu, Vlad ; Maroney, Michael J ; Declercq, Jean-Paul ; Soumillion, Patrice ; Hols, Pascal. Lactate racemase is a nickel-dependent enzyme activated by a widespread maturation system.<\/i>. In: Nature Communications<\/i>, Vol. 5, p. 3615 (2014). doi:10.1038\/ncomms4615.<\/p>\n

http:\/\/hdl.handle.net\/2078.1\/156031<\/a><\/p>\n<\/div>\n<\/div>\n

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2013<\/strong><\/h3>\n
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Alsteens, David ; Trabelsi, Heykel ; Soumillion, Patrice ; Dufr\u00eane, Yves. Multiparametric atomic force microscopy imaging of single bacteriophages extruding from living bacteria<\/i>. In: Nature Communications<\/i>, Vol. 4, p. 1-7 (2013). doi:10.1038\/ncomms3926.<\/p>\n

http:\/\/hdl.handle.net\/2078.1\/135929<\/a><\/p>\n<\/div>\n<\/div>\n

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2012<\/strong><\/h3>\n
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Ponsard, Isabelle ; Soumillion, Patrice. New immunoenzymatic strategy for rapid and selective growth of salmonella.<\/i>. In: Journal of clinical microbiology<\/i>, Vol. 50, p. 4138-40 (2012). doi:10.1128\/JCM.01765-12.<\/p>\n

http:\/\/hdl.handle.net\/2078.1\/117045<\/a><\/p>\n<\/div>\n<\/div>\n

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2011<\/strong><\/h3>\n
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Volkov, Alexander N ; Barrios, Humberto ; Mathonet, Pascale ; Evrard, Christine ; Ubbink, Marcellus ; Declercq, Jean-Paul ; Soumillion, Patrice ; Fastrez, Jacques. Engineering an allosteric binding site for aminoglycosides into TEM1-\u03b2-Lactamase.<\/i>. In: ChemBioChem : a European journal of chemical biology<\/i>, Vol. 12, no. 6, p. 904-13 (2011). doi:10.1002\/cbic.201000568.<\/p>\n

http:\/\/hdl.handle.net\/2078.1\/108346<\/a><\/p>\n<\/div>\n<\/div>\n

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Woronoff, Gabrielle ; El Harrak, Abdeslam ; Mayot, Estelle ; Schicke, Olivier ; Miller, Oliver J ; Soumillion, Patrice ; Griffiths, Andrew D ; Ryckelynck, Michael. New generation of amino coumarin methyl sulfonate-based fluorogenic substrates for amidase assays in droplet-based microfluidic applications.<\/i>. In: Analytical Chemistry<\/i>, Vol. 83, no. 8, p. 2852-2857 (2011). doi:10.1021\/ac200373n.<\/p>\n

http:\/\/hdl.handle.net\/2078.1\/162038<\/a><\/p>\n<\/div>\n<\/div>\n

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2010<\/strong><\/h3>\n
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Shi, Yi-Feng ; Soumillion, Patrice ; Ueda, Mitsuyoshi. Effects of catalytic site mutations on active expression of phage fused penicillin acylase<\/i>. In: Journal of Biotechnology<\/i>, Vol. 145, no. 2, p. 139-142 (2010). doi:10.1016\/j.jbiotec.2009.11.009.<\/p>\n

http:\/\/hdl.handle.net\/2078.1\/34161<\/a><\/p>\n<\/div>\n<\/div>\n

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Mathieu, Val\u00e9ry ; Fastrez, Jacques ; Soumillion, Patrice. Engineering allosteric regulation into the hinge region of a circularly permuted TEM-1 {beta}-lactamase.<\/i>. In: Protein engineering, design & selection : PEDS<\/i>, Vol. 23, no. 9, p. 699-709 (2010). doi:10.1093\/protein\/gzq041.<\/p>\n

http:\/\/hdl.handle.net\/2078.1\/32809<\/a><\/p>\n<\/div>\n<\/div>\n

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Deschuyteneer, Genevi\u00e8ve ; Garcia, Stephanie ; Michiels, Benjamin ; Baudoux, Bruno ; Degand, Herv\u00e9 ; Morsomme, Pierre ; Soumillion, Patrice. Intein-Mediated Cyclization of Randomized Peptides in the Periplasm of Escherichia coli and Their Extracellular Secretion<\/i>. In: ACS Chemical Biology<\/i>, Vol. 5, no. 7, p. 691-700 (2010). doi:10.1021\/cb100072u.<\/p>\n

http:\/\/hdl.handle.net\/2078.1\/33700<\/a><\/p>\n<\/div>\n<\/div>\n<\/div>\n

2020<\/strong><\/h3>\n

Dorrazehi, Gol Mohammad ; Worms, Sebastian ; Chirakadavil, Jason Baby ; Mignolet, Johann ; Hols, Pascal ; et. al. Building scarless gene libraries in the chromosome of bacteria.<\/i>\u00a0In: Iranzo, Olga, Roque, Ana Cec\u00edlia, Springer Protocols \u2013 Peptide and Protein Engineering, From Concepts to Biotechnological Applications<\/i>, \u00a02020<\/p>\n

http:\/\/hdl.handle.net\/2078.1\/231618<\/a><\/p>\n

Urvoas, Agathe ; Minard, Philippe ; Soumillion, Patrice. Phage display methodologies.<\/i>\u00a0In: Iranzo, Olga, Roque, Ana Cec\u00edlia, Springer Protocols \u2013 Peptide and Protein Engineering, From Concepts to Biotechnological Applications<\/i>, \u00a02020<\/p>\n

http:\/\/hdl.handle.net\/2078.1\/231617<\/a><\/p>\n

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2017<\/strong><\/h3>\n
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Desguin, Beno\u00eet ; Soumillion, Patrice ; Hols, Pascal ; Hu, Jian ; Hausinger, Robert P.. Lactate Racemase and Its Niacin-Derived, Covalently-Tethered, Nickel Cofactor<\/i>. In: Deborah Zamble, Magdalena Rowi\u0144ska-\u017byrek, Henryk Koz\u0142owski, The Biological Chemistry of Nickel<\/i> (Metallobiology Series; 10), The Royal Society of Chemistry, 2017. 978-1-78262-498-1. doi:10.1039\/9781788010580.<\/p>\n

http:\/\/hdl.handle.net\/2078.1\/185720<\/a><\/p>\n<\/div>\n<\/div>\n<\/div>\n","protected":false},"excerpt":{"rendered":"

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